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Author Topic: Andamanese II
xyyman
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Name
Whole Genome Sequences for 60 Indian Individuals
Submitting Centre
Universitat Pompeu Fabra
Secondary accession(s)
ERP017860
Description
To shed light on the peopling of South Asia and the origins of the morphological adaptations found there, we analyzed whole-genome sequences from 10 Andamanese individuals and compared them with sequences for 60 individuals from mainland Indian populations with different ethnic histories and with publicly available data from other populations. We show that all Asian and Pacific populations share a single origin and expansion out of Africa, contradicting an earlier proposal of two independent waves of migration. We also show that populations from South and Southeast Asia harbor a small proportion of ancestry from an unknown extinct hominin, and this ancestry is absent from Europeans and East Asians. The footprints of adaptive selection in the genomes of the Andamanese show that the characteristic distinctive phenotypes of this population (including very short stature) [b]do not reflect an ancient African origin [/n]but instead result from strong natural selection on genes related to human body size.

free dataset
https://www.ebi.ac.uk/ena/data/search?query=PRJEB16019


Reply to ‘No evidence for unknown archaic ancestry in South Asia’

Data availability
All sequences produced in this project have been deposited in the European Nucleotide Archive (ENA) under accession codes PRJEB11455 (Andamanese whole-genome sequences (FASTQ, BAM and VCF files)) and PRJEB16019 (all remaining continental Indian whole-genome sequences (FASTQ, BAM and a merged VCF file)).

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Without data you are just another person with an opinion - Deming

Posts: 12143 | From: When you have eliminated the impossible, whatever remains, however improbable | Registered: Jun 2007  |  IP: Logged | Report this post to a Moderator
Djehuti
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The Andamanese best reflect ASI (Ancestral South Indian Ancestry) or more accurately one intermediate to ASI and aboriginal populations of Southeast Asia.

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Mahirap gisingin ang nagtutulog-tulugan.

Posts: 26322 | From: Atlanta, Georgia, USA | Registered: Feb 2005  |  IP: Logged | Report this post to a Moderator
the lioness,
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As usual xyyman leaves out the title of the article

https://repositori.upf.edu/bitstream/handle/10230/34401/Mondal_NG_Gen.pdf?sequence=1&isAllowed=y

Nat Genet. 2016 Sep;48(9):1066-70. doi: 10.1038/ng.3621. Epub 2016 Jul 25.

Genomic analysis of Andamanese provides insights into ancient human migration into Asia and adaptation.


Mondal M1, Casals F2, Xu T3, Dall'Olio GM4, Pybus M1, Netea MG5, Comas D1, Laayouni H1,6, Li Q3, Majumder PP7, Bertranpetit J1,8.

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DD'eDeN
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Show me one article or Western science study that refers to Andamanese, Congo, Papuan, Australian Pygmy populations as "normal stature" and their neighbors as "very tall stature".

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xyambuatlaya

Posts: 2021 | From: Miami | Registered: Aug 2014  |  IP: Logged | Report this post to a Moderator
   

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